Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868999.1_cds_XP_016433634.1_29772
CDS Infomation

[gene=LOC107760132] [db_xref=GeneID:107760132] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016433634.1] [location=122807..124186] [gbkey=CDS]
Sequence

ATGGATGAACAATCTACTAAAGAAACAATGATTACTAGAGAAGAAATTGGCAATCATCAA
GATGAATGGAACATTACAATTCAAGATGAATGGAACATTACAATTCAAGAGTCAAACTCA
GATTCTCATGAAATCAGTGAAAATGCGAGACAATGGCTAAAATCCTTAGAGAAGAGCAGC
GAGTACCCCACCATTGGCTCATCACAGAAGCCAAAGATACACATGGTCCCTAAAATGCAT
CGCGAGATTGAATCAAATGTATGGTGCTATGAGCCCCTTGTGGTTGCTCTCGGTCCATTT
CACCATGGAAAATCCAAGCTTCAACCTATGGAGAAGTACAAGGAGATGCTGGCAATTCAG
TTTGCTGATCAAGAAAGCACCAAACTACCATGGCTTTTAACAAAATCAGTGTCCATTGAT
GAGCTTTACAAAATGGTGAAGAACATTGTCCCTAATGTCAGGGACTGCTATGCTGAGGAC
ATAACTAAATATTACAGCGACGAGGAGTTTGCAAAGATGATGTTCTTGGATGGCTGTTTC
ATTCTCCAATATATTCACTGCCTTGTCACTGGCAACTATAAGCAGCTGCAGATGAAGAGC
CATGATATAGCTTTCATTCGTCGTGATCTTTTCTTACTTGAAAATCAGTTACCTTTTGAA
GTCCTGCATGTGTTAATGAGCTGTAGGTTCAAGAAAGATGAAGGAATGAGGATGATTAAA
ACATTTATCTCGCGTGCACATGCAAAGCCCCCTCAAAATCATGGATTAATTCAAAGTATC
AATAATTTCTTTCTGGGTTTCTTTGGCAAGATTTATGAAGGAGAAGGGCCTTACCTGATG
AAAGAAGAAAATCCTGCTCATCTGCTCGAGATATCAAGAACGCAACTCATAAACCCAAAT
GTTTTCTCAGAAGGCGGATACTATCTAAGGGGTGAGTGGTGCTCATATCGCTCAGCCATG
GAGCTCAAGAAAGCAGGAATATATTTCAGGCGTGGAAAGAGTCGTCGTCTTTCAGATATT
AAGTTCAATTCATTCCGTTTCTCAGCTCTTTTAACACTTCCACCTATAACCATAGATGAT
TCAACCAAGTCGGAGCTATTAAACTTAGTTGCATATGAGGCATGCCCTGATACACCAGAT
GACTTTGGTATTACATCTTATCTTTGCTTTATGGATTCACTAATTGATCGTGCTGAAGAT
GTTAAGGAGCTTACGTCAAAAGGTATATTACTTAACTTTCTTGGAAGTGATCAAGAAGTA
GCAAATCTCTTCAATGAGATAGCAACAGATTTGGTGCCAAATCCTCATGCCTTTATTGAT
GTGAAACACAAAATTGAGAATCATTACAATAACAAAGGAAAAATATGGATTGCTGAGTGA

Peptide Sequence

PEP ID

XP_016433634.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MDEQSTKETMITREEIGNHQDEWNITIQDEWNITIQESNSDSHEISENARQWLKSLEKSS
EYPTIGSSQKPKIHMVPKMHREIESNVWCYEPLVVALGPFHHGKSKLQPMEKYKEMLAIQ
FADQESTKLPWLLTKSVSIDELYKMVKNIVPNVRDCYAEDITKYYSDEEFAKMMFLDGCF
ILQYIHCLVTGNYKQLQMKSHDIAFIRRDLFLLENQLPFEVLHVLMSCRFKKDEGMRMIK
TFISRAHAKPPQNHGLIQSINNFFLGFFGKIYEGEGPYLMKEENPAHLLEISRTQLINPN
VFSEGGYYLRGEWCSYRSAMELKKAGIYFRRGKSRRLSDIKFNSFRFSALLTLPPITIDD
STKSELLNLVAYEACPDTPDDFGITSYLCFMDSLIDRAEDVKELTSKGILLNFLGSDQEV
ANLFNEIATDLVPNPHAFIDVKHKIENHYNNKGKIWIAE

Transcript Sequence

Gene sequence data has not been registered.